Fast and sensitive read alignment
Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes. Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes.
- Devel package for openSUSE:Factory
- Links to openSUSE:Factory / bowtie2
- Download package
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Checkout Package
osc -A https://api.opensuse.org checkout science/bowtie2 && cd $_
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Source Files
Filename | Size | Changed |
---|---|---|
bowtie2-2.5.3.tar.gz | 0010635819 10.1 MB | |
bowtie2.changes | 0000013054 12.7 KB | |
bowtie2.spec | 0000002914 2.85 KB | |
simde-0.7.6.tar.gz | 0006125123 5.84 MB |
Revision 20 (latest revision is 26)
buildservice-autocommit
accepted
request 1037027
from
Pierre Bonamy (flyos)
(revision 20)
baserev update by copy to link target
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