Revisions of bowtie2
buildservice-autocommit
accepted
request 1151250
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Pierre Bonamy (flyos)
(revision 26)
baserev update by copy to link target
Pierre Bonamy (flyos)
accepted
request 1150179
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Atri Bhattacharya (badshah400)
(revision 25)
Update to version 2.5.3.
buildservice-autocommit
accepted
request 1119256
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Pierre Bonamy (flyos)
(revision 24)
baserev update by copy to link target
Pierre Bonamy (flyos)
accepted
request 1118941
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Atri Bhattacharya (badshah400)
(revision 23)
* Update to version 2.5.2. * Update simde to version 0.7.6. * Allow building with LTO, do not set _lto_cflags to %{nil}.
buildservice-autocommit
accepted
request 1059433
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Pierre Bonamy (flyos)
(revision 22)
baserev update by copy to link target
Pierre Bonamy (flyos)
accepted
request 1059201
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Atri Bhattacharya (badshah400)
(revision 21)
Update to version 2.5.1
buildservice-autocommit
accepted
request 1037027
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Pierre Bonamy (flyos)
(revision 20)
baserev update by copy to link target
Pierre Bonamy (flyos)
accepted
request 1036958
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Atri Bhattacharya (badshah400)
(revision 19)
- Update to version 2.5.0: * Overall improvements in the use of prefetch instructions. * Made input/output fully asynchronous by using a dedicated thread. * Added support for AVX2 256-bit instructions with can be enabled by setting the SSE_AXV2 environment variable at compile time. * Fixed an issue causing bowtie2 to crash when processing ZSTD files with high compression ratios. * Changed the way that unique alignments are counted in summary message to better match up with filters on SAM output.
Pierre Bonamy (flyos)
accepted
request 947770
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Atri Bhattacharya (badshah400)
(revision 18)
- Update to version 2.4.5. - Update simde to version 0.7.2.
Pierre Bonamy (flyos)
accepted
request 903791
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Atri Bhattacharya (badshah400)
(revision 17)
- Update to version 2.4.4. - Update simde to version 0.7.0. - Drop BuildRequires tbb-devel: no longer required. - RelWithDebInfo isn't supported and assumes fully unoptimised Debug mode; use Release mode instead by passing `-DCMAKE_RELEASE_TYPE=Release` to cmake.
buildservice-autocommit
accepted
request 843449
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Pierre Bonamy (flyos)
(revision 16)
baserev update by copy to link target
Pierre Bonamy (flyos)
accepted
request 843290
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Atri Bhattacharya (badshah400)
(revision 15)
(Sorry for the goof-up in my previous sr!) * Actually update bowtie2 source to version 2.4.2 (fixing previous revision). * Drop patches incorporated upstream: * bowtie2-processor_support.patch (commit ebb07cf). * bowtie2-cmake-install-targets.patch (commit c9d92ce). * Package README.md file as doc.
buildservice-autocommit
accepted
request 842506
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Pierre Bonamy (flyos)
(revision 14)
baserev update by copy to link target
Pierre Bonamy (flyos)
accepted
request 842103
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Atri Bhattacharya (badshah400)
(revision 13)
- Update to version 2.4.2. - Drop _service file and use tagged version of simde instead (at version 0.6.0); correspondingly drop the obsinfo and obscpio files as well.
buildservice-autocommit
accepted
request 814674
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Pierre Bonamy (flyos)
(revision 12)
baserev update by copy to link target
Pierre Bonamy (flyos)
accepted
request 814673
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Pierre Bonamy (flyos)
(revision 11)
- Added bowtie2-processor_support.patch to fix GCC10 build fail - Added %fdupes in the spec files to handle duplicated binary files
buildservice-autocommit
accepted
request 809909
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Pierre Bonamy (flyos)
(revision 10)
baserev update by copy to link target
Pierre Bonamy (flyos)
accepted
request 809852
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Atri Bhattacharya (badshah400)
(revision 9)
- Update to version 2.4.1: - Add bowtie2-cmake-install-targets.patch to fix cmake scripts, specfically adding install targets and fixing tests (still does not work) [gh#BenLangmead/bowtie2#292]. - Use cmake for building (BuildRequires: cmake); adapt appropriately for aarch64. - Use pkgconfig based BuildRequires for zlib.
buildservice-autocommit
accepted
request 805305
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Pierre Bonamy (flyos)
(revision 8)
baserev update by copy to link target
Pierre Bonamy (flyos)
accepted
request 803240
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Guillaume GARDET (Guillaume_G)
(revision 7)
- Fix aarch64 build with: * simde sources * export POPCNT_CAPABILITY=0
Displaying revisions 1 - 20 of 26