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File jmol.man of Package jmol
.\" Manpage for jmol. .\" Contact thod_@gmx.de to correct errors or typos. .TH man 1 "24 May 2015" "INST_VERSION" "jmol man page" .SH NAME jmol \- INST_SUMMARY .SH SYNOPSIS jmol [options] .SH DESCRIPTION Jmol is an open-source Java viewer for chemical structures in 3D with features for chemicals, crystals, materials and biomolecules. .SH OPTIONS -o,--noconsole no console -- all output to sysout -c,--check check script syntax only - no file loading -k,--kiosk kiosk mode -- no frame -C,--checkload check script syntax only - with file loading -s,--script script file to execute or '-' for System.in -q,--quality JPG image quality (1-100; default 75) or PNG image compression (0-9; default 2, maximum compression 9) -g,--geometry window width x height, e.g. -g500x500 -p,--printOnly send only output from print messages to console (implies -i) -x,--exit exit after script (implicit with -n) -j,--jmolscript2 Jmol script to execute AFTER -s option -J,--jmolscript1 Jmol script to execute BEFORE -s option -P,--port port for JSON/MolecularPlayground-style communication -D <property=value> supported options are given below -I,--input allow piping of input from System.Input -L,--nosplash start with no splash screen -M,--multitouch use multitouch interface (requires "sparshui" parameter -R,--restricted restrict local file access -T,--headlessmaxtime headless max time (sec) -b,--backgroundtransparent transparent background -d,--debug debug -h,--help give this help page -i,--silent silent startup operation -l,--list list commands during script execution -m,--menu menu file to use -n,--nodisplay no display (and also exit when done) -r,--restrictSpt restrict local file access (allow reading of SPT files) -t,--threaded independent command thread -w,--write CLIP or GIF|JPG|JPG64|PNG|PPM:filename .SH EXAMPLES Jmol -ions myscript.spt -w JPEG:myfile.jpg > output.txt The -D options are as follows (defaults in parenthesis) and must be called preceding '-jar Jmol.jar': cdk.debugging=[true|false] (false) cdk.debug.stdout=[true|false] (false) display.speed=[fps|ms] (ms) logger.debug=[true|false] (false) logger.error=[true|false] (true) logger.fatal=[true|false] (true) logger.info=[true|false] (true) logger.logLevel=[true|false] (false) logger.warn=[true|false] (true) plugin.dir (unset) user.language=[ca|cs|de|en_GB|en_US|es|fr|hu|it|ko|nl|pt_BR|tr|zh_TW] (en_US) .SH SEE ALSO java(1) For more information, see also <http://jmol.sourceforge.net/> .SH BUGS No known bugs. .SH AUTHOR Jmol authors (jmol-developers@lists.sf.net)
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