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openSUSE:Backports:SLE-15-SP3:Update
bowtie
bowtie.spec
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File bowtie.spec of Package bowtie
# # spec file for package bowtie # # Copyright (c) 2016 SUSE LINUX GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed # upon. The license for this file, and modifications and additions to the # file, is the same license as for the pristine package itself (unless the # license for the pristine package is not an Open Source License, in which # case the license is the MIT License). An "Open Source License" is a # license that conforms to the Open Source Definition (Version 1.9) # published by the Open Source Initiative. # Please submit bugfixes or comments via http://bugs.opensuse.org/ # Name: bowtie Version: 1.2.3 Release: 0 Summary: Fast and memory-efficient short read aligner License: Artistic-1.0 Group: Productivity/Scientific/Other Url: http://bio-bowtie.sourceforge.net/ Source: https://github.com/BenLangmead/%{name}/archive/v%{version}.tar.gz BuildRequires: gcc-c++ BuildRequires: pkgconfig(zlib) BuildRequires: tbb-devel BuildRoot: %{_tmppath}/%{name}-%{version}-build ExclusiveArch: x86_64 s390x ppc64le ppc64 %description Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep its memory footprint small: typically about 2.2 GB for the human genome (2.9 GB for paired-end). %prep %setup -q %build make %{?_smp_mflags} %install %make_install prefix=%{_prefix} sed -i '1{s|^#!.*env python|#!/usr/bin/python|}' %{buildroot}%{_bindir}/bowtie* %files %defattr(-,root,root) %doc README MANUAL AUTHORS NEWS TUTORIAL VERSION %license LICENSE %{_bindir}/* %changelog
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