File ghc-ClustalParser.spec of Package ghc-ClustalParser

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File ghc-ClustalParser.spec of Package ghc-ClustalParser

#
# spec file for package ghc-ClustalParser
#
# Copyright (c) 2017 SUSE LINUX GmbH, Nuernberg, Germany.
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.

# Please submit bugfixes or comments via http://bugs.opensuse.org/
#

%global pkg_name ClustalParser
%bcond_with tests
Name:           ghc-%{pkg_name}
Version:        1.2.1
Release:        0
Summary:        Libary for parsing Clustal tools output
License:        GPL-3.0+
Group:          Development/Libraries/Haskell
URL:            https://hackage.haskell.org/package/%{pkg_name}
Source0:        https://hackage.haskell.org/package/%{pkg_name}-%{version}/%{pkg_name}-%{version}.tar.gz
BuildRequires:  chrpath
BuildRequires:  ghc-Cabal-devel
BuildRequires:  ghc-cmdargs-devel
BuildRequires:  ghc-either-unwrap-devel
BuildRequires:  ghc-parsec-devel
BuildRequires:  ghc-rpm-macros
BuildRequires:  ghc-text-devel
BuildRequires:  ghc-vector-devel
%if %{with tests}
BuildRequires:  ghc-hspec-devel
%endif

%description
Currently contains parsers and datatypes for: clustalw2, clustalo, mlocarna,
cmalign

Clustal tools are multiple sequence alignment tools for biological sequence
like DNA, RNA and Protein. For more information on clustal Tools refer to
<http://www.clustal.org/>.

Mlocarna is a multiple sequence alignment tool for RNA sequences with secondary
structure output. For more information on mlocarna refer to
<http://www.bioinf.uni-freiburg.de/Software/LocARNA/>.

Cmalign is a multiple sequence alignment program based on RNA family models and
produces ,among others, clustal output. It is part of infernal
<http://infernal.janelia.org/>.

%package devel
Summary:        Haskell %{pkg_name} library development files
Group:          Development/Libraries/Haskell
Requires:       %{name} = %{version}-%{release}
Requires:       ghc-compiler = %{ghc_version}
Requires(post): ghc-compiler = %{ghc_version}
Requires(postun): ghc-compiler = %{ghc_version}

%description devel
This package provides the Haskell %{pkg_name} library development files.

%prep
%setup -q -n %{pkg_name}-%{version}

%build
%ghc_lib_build

%install
%ghc_lib_install
%ghc_fix_rpath %{pkg_name}-%{version}

%check
%cabal_test

%post devel
%ghc_pkg_recache

%postun devel
%ghc_pkg_recache

%files -f %{name}.files
%doc LICENSE
%{_bindir}/ClustalParserTest

%files devel -f %{name}-devel.files
%doc README.md changelog

%changelog

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File ghc-ClustalParser.spec of Package ghc-ClustalParser

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