File ncbi-vdb.changes of Package ncbi-vdb

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File ncbi-vdb.changes of Package ncbi-vdb

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Wed Apr 19 09:06:34 UTC 2023 - Vojtech Zeisek <Vojtech.Zeisek@opensuse.org>

- Updated to version 3.0.2; list of changes between version 3.0.0
  and 3.0.2:
  - ncbi-vdb: changed version to match that of sra-tools
  - build: adapted to support building for Conan
  - build: added support for generating coverage reports
  - build: added support for overriding cmake and ctest commands
  - build: in source builds are no longer supported
  - build: now supports custom library installation directory
  - build: will use a system-provided libmbedtls, otherwise the
    copy included in the source code will be used
  - kff: now using system-provided libmagic if present
  - kfg: fixed a bug that caused override of user configuration
  - kfg, ncbi-vdb: fixed tests that overwrite user configuration
  - kfg, sra-tools: removed interactive requirement to configure
    SRA Toolkit
  - kfs: fixed bug with long paths
  - kns, sra-tools: allow to use AWS data with compute environment
    via proxy
  - ncbi-vdb: fixed crash related to mbedtls
  - ncbi-vdb: fixed failing tests related to sralite
  - pacbio-load, vdb: hdf5 support is now a part of
    sra-tools/pacbio-load; uses system-provided libhdf5
  - sra-pileup, vfs: fixed crash when working with no-quality run
  - sra-tools, vdb: retired vdb-get
  - sra-tools, vfs: fixed infinite loop when processing bad
    response when resolving accession
  - vdb: fixed a bug that allowed a null pointer to be used
  - vdb: kxml and kxfs are combined and moved to sra-tools
  - vdb: memmove should be used instead of memcpy in this
    repository. We added an automated check for that. New
    code containing memcpy will fail this check
  - vdb: updated zlib version to fix vulnerability
  - vdb: VTable can copy columns
  - vfs: now recognizes sralite.vdbcache files
- Moved README, license and changes into devel package and drop
  unnecessary main package (which only had these doc files
  anyway).
- Small updates of spec file according to spec-cleaner

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Mon Sep 12 18:36:51 UTC 2022 - Stefan Brüns <stefan.bruens@rwth-aachen.de>

- Initial package version (3.0.0)

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