File R-statgenGxE.spec of Package R-statgenGxE

Overview Repositories Revisions Requests Users Attributes Meta

File R-statgenGxE.spec of Package R-statgenGxE

# Automatically generated by CRAN2OBS
# 
# Spec file for package statgenGxE 
# This file is auto-generated using information in the package source, 
# esp. Description and Summary. Improvements in that area should be 
# discussed with upstream. 
# 
# Copyright (c) 2024 SUSE LINUX GmbH, Nuernberg, Germany. 
# 
# All modifications and additions to the file contributed by third parties 
# remain the property of their copyright owners, unless otherwise agreed 
# upon. The license for this file, and modifications and additions to the 
# file, is the same license as for the pristine package itself (unless the 
# license for the pristine package is not an Open Source License, in which 
# case the license is the MIT License). An "Open Source License" is a 
# license that conforms to the Open Source Definition (Version 1.9) 
# published by the Open Source Initiative. 
#  
# Please submit bugfixes or comments via http://bugs.opensuse.org/ 
# 
 
%global packname  statgenGxE 
%global rlibdir   %{_libdir}/R/library 
 
Name:           R-%{packname} 
Version:        1.0.8 
Release:        0 
Summary:        Genotype by Environment (GxE) Analysis 
Group:          Development/Libraries/Other 
License:        GPL 
URL:            http://cran.r-project.org/web/packages/%{packname} 
Source:         statgenGxE_1.0.8.tar.gz 
Requires:       R-base 
Requires:	R-emmeans
Requires:	R-ggplot2
Requires:	R-gridExtra
Requires:	R-knitr
Requires:	R-lme4
Requires:	R-rlang
Requires:	R-statgenSTA
Requires:	R-xtable
Requires:	R-estimability
Requires:	R-numDeriv
Requires:	R-mvtnorm
Requires:	R-cli
Requires:	R-glue
Requires:	R-gtable
Requires:	R-isoband
Requires:	R-lifecycle
Requires:	R-scales
Requires:	R-tibble
Requires:	R-vctrs
Requires:	R-withr
Requires:	R-evaluate
Requires:	R-highr
Requires:	R-xfun
Requires:	R-yaml
Requires:	R-minqa
Requires:	R-nloptr
Requires:	R-Rcpp
Requires:	R-RcppEigen
Requires:	R-ggrepel
Requires:	R-mapproj
Requires:	R-maps
Requires:	R-qtl
Requires:	R-SpATS
Requires:	R-testthat
Requires:	R-farver
Requires:	R-labeling
Requires:	R-munsell
Requires:	R-R6
Requires:	R-RColorBrewer
Requires:	R-viridisLite
Requires:	R-fields
Requires:	R-spam
Requires:	R-data.table
Requires:	R-fansi
Requires:	R-magrittr
Requires:	R-pillar
Requires:	R-pkgconfig
Requires:	R-colorspace
Requires:	R-utf8
Requires:	R-dotCall64
Requires:	R-brio
Requires:	R-callr
Requires:	R-desc
Requires:	R-digest
Requires:	R-jsonlite
Requires:	R-pkgload
Requires:	R-praise
Requires:	R-processx
Requires:	R-ps
Requires:	R-waldo
Requires:	R-crayon
Requires:	R-fs
Requires:	R-pkgbuild
Requires:	R-rprojroot
Requires:	R-diffobj
Requires:	R-rematch2
 
# %%if 0%%{?sle_version} > 120400 || 0%%{?is_opensuse} 
# # Three others commonly needed 
# BuildRequires:  tex(ae.sty) 
# BuildRequires:  tex(fancyvrb.sty) 
# BuildRequires:  tex(inconsolata.sty) 
# BuildRequires:  tex(natbib.sty) 
# %else 
# BuildRequires:  texlive 
# %endif 
# BuildRequires:  texinfo 
BuildRequires:  fdupes 
BuildRequires:  R-base 
BuildRequires: 	R-emmeans
BuildRequires: 	R-ggplot2
BuildRequires: 	R-gridExtra
BuildRequires: 	R-knitr
BuildRequires: 	R-lme4
BuildRequires: 	R-rlang
BuildRequires: 	R-statgenSTA
BuildRequires: 	R-xtable
BuildRequires: 	R-estimability
BuildRequires: 	R-numDeriv
BuildRequires: 	R-mvtnorm
BuildRequires: 	R-cli
BuildRequires: 	R-glue
BuildRequires: 	R-gtable
BuildRequires: 	R-isoband
BuildRequires: 	R-lifecycle
BuildRequires: 	R-scales
BuildRequires: 	R-tibble
BuildRequires: 	R-vctrs
BuildRequires: 	R-withr
BuildRequires: 	R-evaluate
BuildRequires: 	R-highr
BuildRequires: 	R-xfun
BuildRequires: 	R-yaml
BuildRequires: 	R-minqa
BuildRequires: 	R-nloptr
BuildRequires: 	R-Rcpp-devel
BuildRequires: 	R-RcppEigen-devel
BuildRequires: 	R-ggrepel
BuildRequires: 	R-mapproj
BuildRequires: 	R-maps
BuildRequires: 	R-qtl
BuildRequires: 	R-SpATS
BuildRequires: 	R-testthat
BuildRequires: 	R-farver
BuildRequires: 	R-labeling
BuildRequires: 	R-munsell
BuildRequires: 	R-R6
BuildRequires: 	R-RColorBrewer
BuildRequires: 	R-viridisLite
BuildRequires: 	R-fields
BuildRequires: 	R-spam
BuildRequires: 	R-data.table
BuildRequires: 	R-fansi
BuildRequires: 	R-magrittr
BuildRequires: 	R-pillar
BuildRequires: 	R-pkgconfig
BuildRequires: 	R-colorspace
BuildRequires: 	R-utf8
BuildRequires: 	R-dotCall64
BuildRequires: 	R-brio
BuildRequires: 	R-callr
BuildRequires: 	R-desc
BuildRequires: 	R-digest
BuildRequires: 	R-jsonlite
BuildRequires: 	R-pkgload
BuildRequires: 	R-praise
BuildRequires: 	R-processx
BuildRequires: 	R-ps
BuildRequires: 	R-waldo
BuildRequires: 	R-crayon
BuildRequires: 	R-fs
BuildRequires: 	R-pkgbuild
BuildRequires: 	R-rprojroot
BuildRequires: 	R-diffobj
BuildRequires: 	R-rematch2
 
Suggests:	R-asreml
Suggests:	R-rmarkdown
Suggests:	R-testthat
%description 
Analysis of multi environment data of plant breeding experiments 
following the analyses described in Malosetti, Ribaut, and van Eeuwijk 
(2013), <doi:10.3389/fphys.2013.00044>. One of a series of statistical 
genetic packages for streamlining the analysis of typical plant 
breeding experiments developed by Biometris. Some functions have been 
created to be used in conjunction with the R package 'asreml' for the 
'ASReml' software, which can be obtained upon purchase from 'VSN' 
international (<https://vsni.co.uk/software/asreml-r>). 
 
%prep 
%setup -q -c -n %{packname} 
# the next line is needed, because we build without --clean in between two packages 
rm -rf ~/.R  
 
 
%build 
 
%install 
mkdir -p %{buildroot}%{rlibdir} 
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} 
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) 
rm -f %{buildroot}%{rlibdir}/R.css 
%fdupes -s %{buildroot}%{rlibdir} 
 
#%%check 
#%%{_bindir}/R CMD check %%{packname} 
 
%files 
%dir %{rlibdir}/%{packname} 
%doc %{rlibdir}/%{packname}/DESCRIPTION
%{rlibdir}/%{packname}/INDEX
%{rlibdir}/%{packname}/Meta
%{rlibdir}/%{packname}/NAMESPACE
%doc %{rlibdir}/%{packname}/NEWS.md
%{rlibdir}/%{packname}/R
%{rlibdir}/%{packname}/data
%doc %{rlibdir}/%{packname}/doc
%{rlibdir}/%{packname}/extdata
%doc %{rlibdir}/%{packname}/help
%doc %{rlibdir}/%{packname}/html
%{rlibdir}/%{packname}/reports
%{rlibdir}/%{packname}/
 
%changelog

Places

File R-statgenGxE.spec of Package R-statgenGxE

Places