File mvapich2.changes of Package mvapich2.11314

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File mvapich2.changes of Package mvapich2.11314

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Thu May  2 08:00:51 UTC 2019 - Nicolas Morey-Chaisemartin <nmoreychaisemartin@suse.com>

- Add mvapich2-fix-double-free.patch to fix a segfault
  when running on a machine with no RDMA hardware (bsc#1133797)

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Wed Mar 20 19:01:00 UTC 2019 - Ana Guerrero Lopez <aguerrero@suse.com>

- Add patch to remove obsolete GCC check (bnc#1129421). It also patches
  autogen.sh to get the autotools working in SLE12SP4.
  * 0001-Drop-GCC-check.patch
- Force to re-run autotools to generate properly the files after 
  patching src/binding/cxx/buildiface

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Sun Nov 18 14:21:27 UTC 2018 - eich@suse.com

- Add macro _hpc_mvapich2_modules for modules support (bsc#1116458).

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Mon Sep 10 12:15:10 UTC 2018 - nmoreychaisemartin@suse.com

- Remove bashism in postun scriptlet

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Wed Sep  5 06:54:33 UTC 2018 - nmoreychaisemartin@suse.com

- Fix handling of mpi-selector during updates (bsc#1098653)

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Sun Aug 19 09:21:45 UTC 2018 - eich@suse.com

- macros.hpc-mvapich2:
  replace %%compiler_family by %%hpc_compiler_family

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Mon Jul 16 16:13:32 UTC 2018 - msuchanek@suse.com

- Use sched_yield instead of pthread_yield (boo#1102421).
  - drop mvapich2-pthread_yield.patch

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Mon Jun 18 13:12:15 UTC 2018 - nmoreychaisemartin@suse.com

- Add missing bsc and fate references to changelog

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Tue Jun 12 07:07:37 UTC 2018 - nmoreychaisemartin@suse.com

- Disable HPC builds for SLE12 (fate#323655)

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Sun Mar 25 13:07:18 UTC 2018 - kasimir_@outlook.de

- Change mvapich2-arm-support.patch to provide missing functions for
  armv6hl

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Fri Feb  9 11:29:26 UTC 2018 - cgoll@suse.com

- Fix summary in module files (bnc#1080259)

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Tue Jan 30 20:04:01 UTC 2018 - eich@suse.com

- Use macro in mpivars.(c)sh to be independent of changes to the module
  setup for the compiler (boo#1078364).

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Fri Jan  5 19:03:44 UTC 2018 - eich@suse.com

- Switch from gcc6 to gcc7 as additional compiler flavor for HPC on SLES.
- Fix library package requires - use HPC macro (boo#1074890).

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Fri Oct  6 14:06:37 UTC 2017 - nmoreychaisemartin@suse.com

- Add conflicts between the macros-devel packages

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Thu Oct  5 13:30:48 UTC 2017 - nmoreychaisemartin@suse.com

- Add BuildRequires to libibmad-devel for older release (SLE <= 12.2, Leap <= 42.2)

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Fri Sep 12 15:38:14 UTC 2017 - eich@suse.com

- Add HPC specific build targets using environment modules
  (FATE#321712).

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Tue Sep 12 09:25:01 UTC 2017 - nmoreychaisemartin@suse.com

- Drop unnecessary dependency to xorg-x11-devel

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Mon Sep 11 09:19:37 UTC 2017 - nmoreychaisemartin@suse.com

- Only requires verbs libraries for verbs build.
  libibverbs devel causes a SEGV when run in a chroot using the
  psm or psm2 conduits
- Add testuite packages for all build flavours

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Thu Jul 13 14:59:13 UTC 2017 - nmoreychaisemartin@suse.com

- Add LD_LIBRARY_PATH to mpivars.sh and mpivars.csh

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Thu Jul 13 07:54:38 UTC 2017 - nmoreychaisemartin@suse.com

- Disable rpath in pkgconfig files

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Wed Jul  5 15:12:46 UTC 2017 - nmoreychaisemartin@suse.com

- Remove redondant configure options already passed by %configure

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Mon Jun 26 12:24:30 UTC 2017 - nmoreychaisemartin@suse.com

- Change install dir to allow multiple flavor to be installed
  at the same time (bsc#934090)
- Fix bsc#1045955
  - Fix mvapich2-psm package to use libpsm (TrueScale)
  - Add mvapich2-psm2 package using libpsm2 (OmniPath)

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Mon Jun 26 09:37:42 UTC 2017 - nmoreychaisemartin@suse.com

- Use _multibuild to build the various mvapich2-flavours

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Fri Jun 23 15:40:51 UTC 2017 - nmoreychaisemartin@suse.com

- Replace dependency from libibmad-devel to infiniband-diags-devel

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Wed Jun 14 10:01:07 UTC 2017 - nmoreychaisemartin@suse.com

- Have mvapich2 and mvapich2-psm conflicts between them
- Cleanup spec file
- Remove mvapich2-testsuite RPM

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Thu Jun  8 13:55:32 UTC 2017 - nmoreychaisemartin@suse.com

- Reenable arm compilation
- Rename and cleanup mvapich-s390_get_cycles.patch to
  mvapich2-s390_get_cycles.patch for coherency
- Cleanup mvapich2-pthread_yield.patch
- Add mvapich2-arm-support.patch to provide missing functions for
  armv7hl and aarch64

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Thu Jun  8 11:38:36 UTC 2017 - nmoreychaisemartin@suse.com

- Remove version dependencies to libibumad, libibverbs and librdmacm

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Tue May 16 16:29:41 UTC 2017 - nmoreychaisemartin@suse.com

- Fix mvapich2-testsuite packaging
- Disable build on armv7

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Wed Mar 29 08:06:23 CEST 2017 - pth@suse.de

- Make dependencies on libs now coming from rdma-core versioned.

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Tue Nov 29 13:08:18 CET 2016 - pth@suse.de

- Create environment module (bsc#1004628).

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Wed Nov 23 11:00:43 CET 2016 - pth@suse.de

- Fix URL.
- Update to mvapich 2.2 GA. Changes since rc1:
  MVAPICH2 2.2 (09/07/2016)

* Features and Enhancements (since 2.2rc2):
      - Single node collective tuning for Bridges@PSC, Stampede@TACC and other
        architectures
      - Enable PSM builds when both PSM and PSM2 libraries are present
      - Add support for HCAs that return result of atomics in big endian notation
      - Establish loopback connections by default if HCA supports atomics
  * Bug Fixes (since 2.2rc2):
      - Fix minor error in use of communicator object in collectives
      - Fix missing u_int64_t declaration with PGI compilers
      - Fix memory leak in RMA rendezvous code path

MVAPICH2 2.2rc2 (08/08/2016)

* Features and Enhancements (since 2.2rc1):
      - Enhanced performance for MPI_Comm_split through new bitonic algorithm
      - Enable graceful fallback to Shared Memory if LiMIC2 or CMA transfer fails
      - Enable support for multiple MPI initializations
      - Unify process affinity support in Gen2, PSM and PSM2 channels
      - Remove verbs dependency when building the PSM and PSM2 channels
      - Allow processes to request MPI_THREAD_MULTIPLE when socket or NUMA node
        level affinity is specified
      - Point-to-point and collective performance optimization for Intel Knights
        Landing
      - Automatic detection and tuning for InfiniBand EDR HCAs
      - Warn user to reconfigure library if rank type is not large enough to
        represent all ranks in job
      - Collective tuning for Opal@LLNL, Bridges@PSC, and Stampede-1.5@TACC
      - Tuning and architecture detection for Intel Broadwell processors
      - Add ability to avoid using --enable-new-dtags with ld
      - Add LIBTVMPICH specific CFLAGS and LDFLAGS

* Bug Fixes (since 2.2rc1):
      - Disable optimization that removes use of calloc in ptmalloc hook
        detection code
      - Fix weak alias typos (allows successful compilation with CLANG compiler)
      - Fix issues in PSM large message gather operations
      - Enhance error checking in collective tuning code
      - Fix issues with UD based communication in RoCE mode
      - Fix issues with PMI2 support in singleton mode
      - Fix default binding bug in hydra launcher
      - Fix issues with Checkpoint Restart when launched with mpirun_rsh
      - Fix fortran binding issues with Intel 2016 compilers
      - Fix issues with socket/NUMA node level binding
      - Disable atomics when using Connect-IB with RDMA_CM
      - Fix hang in MPI_Finalize when using hybrid channel
      - Fix memory leaks

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Tue Nov 15 14:04:50 CET 2016 - pth@suse.de

- Update to version 2.2rc1 (fate#319240). Changes since 2.1:

MVAPICH2 2.2rc1 (03/29/2016)

* Features and Enhancements (since 2.2b):
    - Support for OpenPower architecture
        - Optimized inter-node and intra-node communication
    - Support for Intel Omni-Path architecture
        - Thanks to Intel for contributing the patch
        - Introduction of a new PSM2 channel for Omni-Path
    - Support for RoCEv2
    - Architecture detection for PSC Bridges system with Omni-Path
    - Enhanced startup performance and reduced memory footprint for storing
      InfiniBand end-point information with SLURM
        - Support for shared memory based PMI operations
        - Availability of an updated patch from the MVAPICH project website
          with this support for SLURM installations
    - Optimized pt-to-pt and collective tuning for Chameleon InfiniBand
      systems at TACC/UoC
    - Enable affinity by default for TrueScale(PSM) and Omni-Path(PSM2)
      channels
    - Enhanced tuning for shared-memory based MPI_Bcast
    - Enhanced debugging support and error messages
    - Update to hwloc version 1.11.2

* Bug Fixes (since 2.2b):
    - Fix issue in some of the internal algorithms used for MPI_Bcast,
      MPI_Alltoall and MPI_Reduce
    - Fix hang in one of the internal algorithms used for MPI_Scatter
        - Thanks to Ivan Raikov@Stanford for reporting this issue
    - Fix issue with rdma_connect operation
    - Fix issue with Dynamic Process Management feature
    - Fix issue with de-allocating InfiniBand resources in blocking mode
    - Fix build errors caused due to improper compile time guards
        - Thanks to Adam Moody@LLNL for the report
    - Fix finalize hang when running in hybrid or UD-only mode
        - Thanks to Jerome Vienne@TACC for reporting this issue
    - Fix issue in MPI_Win_flush operation
        - Thanks to Nenad Vukicevic for reporting this issue
    - Fix out of memory issues with non-blocking collectives code
        - Thanks to Phanisri Pradeep Pratapa and Fang Liu@GaTech for
          reporting this issue
    - Fix fall-through bug in external32 pack
        - Thanks to Adam Moody@LLNL for the report and patch
    - Fix issue with on-demand connection establishment and blocking mode
        - Thanks to Maksym Planeta@TU Dresden for the report
    - Fix memory leaks in hardware multicast based broadcast code
    - Fix memory leaks in TrueScale(PSM) channel
    - Fix compilation warnings

MVAPICH2 2.2b (11/12/2015)

* Features and Enhancements (since 2.2a):
    - Enhanced performance for small messages
    - Enhanced startup performance with SLURM
        - Support for PMIX_Iallgather and PMIX_Ifence
    - Support to enable affinity with asynchronous progress thread
    - Enhanced support for MPIT based performance variables
    - Tuned VBUF size for performance
    - Improved startup performance for QLogic PSM-CH3 channel
        - Thanks to Maksym Planeta@TU Dresden for the patch

* Bug Fixes (since 2.2a):
    - Fix issue with MPI_Get_count in QLogic PSM-CH3 channel with very large
      messages (>2GB)
    - Fix issues with shared memory collectives and checkpoint-restart
    - Fix hang with checkpoint-restart
    - Fix issue with unlinking shared memory files
    - Fix memory leak with MPIT
    - Fix minor typos and usage of inline and static keywords
        - Thanks to Maksym Planeta@TU Dresden for the patch and suggestions
    - Fix missing MPIDI_FUNC_EXIT
        - Thanks to Maksym Planeta@TU Dresden for the patch
    - Remove unused code
        - Thanks to Maksym Planeta@TU Dresden for the patch
    - Continue with warning if user asks to enable XRC when the system does not
      support XRC

MVAPICH2 2.2a (08/17/2015)

* Features and Enhancements (since 2.1 GA):

- Based on MPICH 3.1.4
  - Support for backing on-demand UD CM information with shared memory
    for minimizing memory footprint
  - Reorganized HCA-aware process mapping
  - Dynamic identification of maximum read/atomic operations supported by HCA
  - Enabling support for intra-node communications in RoCE mode without
    shared memory
  - Updated to hwloc 1.11.0
  - Updated to sm_20 kernel optimizations for MPI Datatypes
  - Automatic detection and tuning for 24-core Haswell architecture

* Bug Fixes (since 2.1 GA):

- Fix for error with multi-vbuf design for GPU based communication
  - Fix bugs with hybrid UD/RC/XRC communications
  - Fix for MPICH putfence/getfence for large messages
  - Fix for error in collective tuning framework
  - Fix validation failure with Alltoall with IN_PLACE option
     - Thanks for Mahidhar Tatineni @SDSC for the report
  - Fix bug with MPI_Reduce with IN_PLACE option
     - Thanks to Markus Geimer for the report
  - Fix for compilation failures with multicast disabled
     - Thanks to Devesh Sharma @Emulex for the report
  - Fix bug with MPI_Bcast
  - Fix IPC selection for shared GPU mode systems
  - Fix for build time warnings and memory leaks
  - Fix issues with Dynamic Process Management
     - Thanks to Neil Spruit for the report
   - Fix bug in architecture detection code
     - Thanks to Adam Moody @LLNL for the report

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Fri Oct 14 11:28:41 CEST 2016 - pth@suse.de

- Create and include modules file for Mvapich2 (bsc#1004628).

- Remove mvapich2-fix-implicit-decl.patch as the fix is upstream.
- Adapt spec file to the changed micro benchmark install directory.

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Sun Jul 24 14:24:59 UTC 2016 - p.drouand@gmail.com

- Update to version 2.1
  * Features and Enhancements (since 2.1rc2):
    - Tuning for EDR adapters
    - Optimization of collectives for SDSC Comet system
    - Based on MPICH-3.1.4
    - Enhanced startup performance with mpirun_rsh
    - Checkpoint-Restart Support with DMTCP (Distributed MultiThreaded
      CheckPointing)
        - Thanks to the DMTCP project team (http://dmtcp.sourceforge.net/) 
    - Support for handling very large messages in RMA
    - Optimize size of buffer requested for control messages in large message
      transfer
    - Enhanced automatic detection of atomic support 
    - Optimized collectives (bcast, reduce, and allreduce) for 4K processes 
    - Introduce support to sleep for user specified period before aborting
    - Disable PSM from setting CPU affinity
    - Install PSM error handler to print more verbose error messages
    - Introduce retry mechanism to perform psm_ep_open in PSM channel
  * Bug-Fixes (since 2.1rc2):
    - Relocate reading environment variables in PSM
    - Fix issue with automatic process mapping
    - Fix issue with checkpoint restart when full path is not given
    - Fix issue with Dynamic Process Management
    - Fix issue in CUDA IPC code path
    - Fix corner case in CMA runtime detection
  * Features and Enhancements (since 2.1rc1):
    - Based on MPICH-3.1.4
    - Enhanced startup performance with mpirun_rsh
    - Checkpoint-Restart Support with DMTCP (Distributed MultiThreaded
      CheckPointing)
    - Support for handling very large messages in RMA
    - Optimize size of buffer requested for control messages in large message
      transfer
    - Enhanced automatic detection of atomic support 
    - Optimized collectives (bcast, reduce, and allreduce) for 4K processes 
    - Introduce support to sleep for user specified period before aborting
    - Disable PSM from setting CPU affinity
    - Install PSM error handler to print more verbose error messages
    - Introduce retry mechanism to perform psm_ep_open in PSM channel
  * Bug-Fixes (since 2.1rc1):
    - Fix failures with shared memory collectives with checkpoint-restart
    - Fix failures with checkpoint-restart when using internal communication
      buffers of different size       
    - Fix undeclared variable error when --disable-cxx is specified with
      configure
    - Fix segfault seen during connect/accept with dynamic processes
    - Fix errors with large messages pack/unpack operations in PSM channel
    - Fix for bcast collective tuning
    - Fix assertion errors in one-sided put operations in PSM channel
    - Fix issue with code getting stuck in infinite loop inside ptmalloc
    - Fix assertion error in shared memory large message transfers
    - Fix compilation warnings
  * Features and Enhancements (since 2.1a):
    - Based on MPICH-3.1.3
    - Flexibility to use internal communication buffers of different size for
      improved performance and memory footprint
    - Improve communication performance by removing locks from critical path
    - Enhanced communication performance for small/medium message sizes
    - Support for linking Intel Trace Analyzer and Collector
    - Increase the number of connect retry attempts with RDMA_CM
    - Automatic detection and tuning for Haswell architecture
  * Bug-Fixes (since 2.1a):
    - Fix automatic detection of support for atomics
    - Fix issue with void pointer arithmetic with PGI
    - Fix deadlock in ctxidup MPICH test in PSM channel
    - Fix compile warnings
  * Features and Enhancements (since 2.0):
    - Based on MPICH-3.1.2
    - Support for PMI-2 based startup with SLURM
    - Enhanced startup performance for Gen2/UD-Hybrid channel
    - GPU support for MPI_Scan and MPI_Exscan collective operations
    - Optimize creation of 2-level communicator
    - Collective optimization for PSM-CH3 channel
    - Tuning for IvyBridge architecture
    - Add -export-all option to mpirun_rsh
    - Support for additional MPI-T performance variables (PVARs)
      in the CH3 channel
    - Link with libstdc++ when building with GPU support
        (required by CUDA 6.5)
  * Bug-Fixes (since 2.0):
    - Fix error in large message (>2GB) transfers in CMA code path
    - Fix memory leaks in OFA-IB-CH3 and OFA-IB-Nemesis channels
    - Fix issues with optimizations for broadcast and reduce collectives
    - Fix hang at finalize with Gen2-Hybrid/UD channel
    - Fix issues for collectives with non power-of-two process counts
    - Make ring startup use HCA selected by user
    - Increase counter length for shared-memory collectives
- Use download Url as source
- Some other minor improvements
- Add mvapich2-fix-implicit-decl.patch

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Thu Oct  9 13:32:28 CEST 2014 - pth@suse.de

- Don't provide the full source uri as build servis can't handle it.

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Wed Oct  8 17:12:27 CEST 2014 - pth@suse.de

- Only run autogen.sh if the distribution has a new enough automake.

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Wed Sep 24 17:06:22 CEST 2014 - pth@suse.de

- Update to mvapich2 2.0 GMC:
  * Features and Enhancements (since 2.0rc2):
    - Consider CMA in collective tuning framework

* Bug-Fixes (since 2.0rc2):
    - Fix bug when disabling registration cache
    - Fix shared memory window bug when shared memory collectives 
      are disabled.
    - Fix mpirun_rsh bug when running mpmd programs with no arguments

- Exclude Aarch64 for the time being as asm/timex.h seems to be missing
  from the glibc kernel headers.

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Tue Jun  3 11:24:34 CEST 2014 - pth@suse.de

- Update to OFED 3.12 final.

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Mon May 26 13:02:24 CEST 2014 - pth@suse.de

- Update to 2.0rc2:
  * Features and Enhancements (since 2.0rc1):
    - CMA support is now enabled by default
    - Optimization of collectives with CMA support
    - RMA optimizations for shared memory and atomic operations
    - Tuning RGET and Atomics operations
    - Tuning RDMA FP-based communication
    - MPI-T support for additional performance and control variables
    - The --enable-mpit-pvars=yes configuration option will now
      enable only MVAPICH2 specific variables
    - Large message transfer support for PSM interface
    - Optimization of collectives for PSM interface
    - Updated to hwloc v1.9

* Bug-Fixes (since 2.0rc1):
    - Fix multicast hang when there is a single process on one node 
      and more than one process on other nodes
    - Fix non-power-of-two usage of scatter-doubling-allgather algorithm 
    - Fix for bcastzero type hang during finalize
    - Enhanced handling of failures in RDMA_CM based 
      connection establishment
    - Fix for a hang in finalize when using RDMA_CM
    - Finish receive request when RDMA READ completes in RGET protocol
    - Always use direct RDMA when flush is used
    - Fix compilation error with --enable-g=all in PSM interface 
    - Fix warnings and memory leaks

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Thu May 15 16:01:50 CEST 2014 - pth@suse.de

- mvapich2-psm-devel requires infinipath-psm-devel.
- Remove redundent requires for the devel-static package.

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Wed May  7 15:40:33 UTC 2014 - stefan.fent@suse.com

- remove typo in mvapich-s390_get_cycles.patch

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Tue Apr 29 13:47:06 CEST 2014 - pth@suse.de

- Remove bogus 0 from spec.

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Mon Apr 28 12:30:12 CEST 2014 - pth@suse.de

- Remove all additional mvapich specific CFLAGS and extra LIBS.

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Fri Apr 25 09:41:47 CEST 2014 - pth@suse.de

- Fix ExclusiveArch
- Only PSM needs explicit configuration so drop the else branch
  in configure call.
- mvapich2 now builds in parallel so tell make.

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Thu Apr 24 21:27:06 CEST 2014 - pth@suse.de

- Build Mvapich2 for Qlogic from its own mvapich2-psm.spec.

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Wed Apr 23 18:04:36 CEST 2014 - pth@suse.de

- Add mvapich2-pthread_yield.patch to define GNU_SOURCE before
  including pthread.h to get pthread_yield declared.

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Wed Apr 23 14:48:07 CEST 2014 - pth@suse.de

- Don't require libibcommon as it's gone with OFED 3.12.

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Wed Apr 16 15:50:22 UTC 2014 - stefan.fent@suse.com

- add asm code from kernel to properly implement get_cycles on 
  s390 and s390x (bnc #870424) (mvapich-s390_get_cycles.patch)

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Mon Apr  7 14:49:22 CEST 2014 - pth@suse.de

- Fix spec so that testsuite builds correctly.

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Sat Apr  5 20:28:49 CEST 2014 - pth@suse.de

- Update config.* to make it build on ppc64le.

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Thu Mar 27 12:56:50 CET 2014 - pth@suse.de

- Regenerate autotool files to get ppc64le recognized.
- The predefined platform macros for s390 are lower case not upcase.

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Wed Mar 26 16:15:45 CET 2014 - pth@suse.de

- Finally got the syntax for conditionals in spec right...
- Add a dummy implementation of get_cycles for s390x.
- Update to 2.0rc1 as this is a MPI-3 implementation. For
  detailed changes see.
- Fix options passed to mpi-selector

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Tue Mar 25 14:42:43 CET 2014 - pth@suse.de

- Include the two COPYRIGHT files in the package.
- BuildRequire kernel-headers on s390x.
- Fix spec file

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Wed Mar  5 14:04:47 CET 2014 - pth@suse.de

- Compile with support for PSM on ix86 (fate#315889).
- mvapich2 has a testsuite, so run it from a separate spec file.

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Mon Feb 10 13:13:39 CET 2014 - pth@suse.de

- Update to 1.9:
- Remove mvapich2-1.0.2-non-void-rtn.patch as the changes are in
  the upstream source.
- Reformat BuildRequires

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Fri Jan 24 19:15:39 CET 2014 - pth@suse.de

- Update to OFED 3.12 daily.

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Fri Feb 29 00:00:00 CET 2008 - - jjolly@suse.de

- Update to 1.0.2 from OFED 1.3 GA release
- Minor changes to return value patch

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Thu Jan 31 00:00:00 CET 2008 - - jjolly@suse.de

- Update to 1.0.1 from OFED 1.3 rc2
- Fixed several 'undefined return value' compile errors

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Tue Jul 10 00:00:00 CET 2007 - - hvogel@suse.de

- Initial Package, Version 0.9.8

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