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mvapich2
mvapich2.spec
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File mvapich2.spec of Package mvapich2
# # spec file for package mvapich2 (Version 1.2p1) # # Copyright (c) 2009 SUSE LINUX Products GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed # upon. The license for this file, and modifications and additions to the # file, is the same license as for the pristine package itself (unless the # license for the pristine package is not an Open Source License, in which # case the license is the MIT License). An "Open Source License" is a # license that conforms to the Open Source Definition (Version 1.9) # published by the Open Source Initiative. # Please submit bugfixes or comments via http://bugs.opensuse.org/ # # norootforbuild Name: mvapich2 Summary: OSU MVAPICH2 MPI package Version: 1.2p1 Release: 2 License: BSD 3-Clause Group: Development/Libraries/Parallel Source0: %{name}-%{version}.tar.bz2 Patch0: mvapich2-1.2-build_fixes.patch Url: http://mvapich.cse.ohio-state.edu/overview/mvapich2/ BuildRoot: %{_tmppath}/%{name}-%{version}-build BuildRequires: gcc-c++ gcc-fortran libibcommon-devel libibumad-devel libibverbs-devel librdmacm-devel mpi-selector python-devel xorg-x11-devel Requires: mpi-selector ExcludeArch: s390 s390x # bug437293 %ifarch ppc64 Obsoletes: mvapich2-64bit %endif # %define _prefix /usr/%_lib/mpi/gcc/%name %description This is an MPI-2 implementation which includes all MPI-1 features. It is based on MPICH2 and MVICH. %package devel License: BSD 3-Clause Group: Development/Libraries/Parallel Summary: OSU MVAPICH2 MPI package Requires: %{name} = %{version} libibverbs-devel libibumad-devel libibcommon-devel librdmacm-devel # bug437293 %ifarch ppc64 Obsoletes: mvapich2-devel-64bit %endif %description devel This is an MPI-2 implementation which includes all MPI-1 features. It is based on MPICH2 and MVICH. %prep %setup -q %patch0 #%patch1 %build export LIBS="-lrdmacm -libverbs -libumad" export CFLAGS="$RPM_OPT_FLAGS -DUSE_HEADER_CACHING -DONE_SIDED -DMPID_USE_SEQUENCE_NUMBERS -D_SHMEM_COLL_ -DRDMA_CM -DDISABLE_PTMALLOC" # ./configure --prefix=%_prefix --libdir=%_libdir --mandir=%_mandir --sysconfdir=%_sysconfdir --with-rdma=gen2 --enable-sharedlibs=gcc CC=gcc CXX=g++ F77=gfortran F90=gfortran ./configure --prefix=%_prefix --libdir=%_libdir --mandir=%_mandir --sysconfdir=%_sysconfdir --with-rdma=gen2 --enable-sharedlibs=gcc --without-mpe make %install make DESTDIR=$RPM_BUILD_ROOT install # Additionally, create the mpivars.[c]sh files. cat > $RPM_BUILD_ROOT/%_prefix/bin/mpivars.csh <<EOF if (\$?path) then if ( "\${path}" !~ *%{_prefix}/bin* ) then set path = ( %{_prefix}/bin \$path ) endif else set path = ( %{_prefix}/bin ) endif if ("1" == "\$?LD_LIBRARY_PATH") then if ("\$LD_LIBRARY_PATH" !~ *%{_prefix}/lib) then setenv LD_LIBRARY_PATH %{_prefix}/lib:\${LD_LIBRARY_PATH} endif else setenv LD_LIBRARY_PATH %{_prefix}/lib endif if (\$?MANPATH) then if ( "\${MANPATH}" !~ *%{_prefix}/man* ) then setenv MANPATH %{_prefix}/man:\$MANPATH endif else setenv MANPATH %{_prefix}/man: endif EOF cat > $RPM_BUILD_ROOT/%_prefix/bin/mpivars.sh <<EOF if ! echo \${PATH} | grep -q %{_prefix}/bin ; then PATH=%{_prefix}/bin:\${PATH} fi if ! echo \${LD_LIBRARY_PATH} | grep -q %{_prefix}/lib ; then export LD_LIBRARY_PATH=%{_prefix}/lib:\${LD_LIBRARY_PATH} fi if ! echo \${MANPATH} | grep -q %{_prefix}/man ; then MANPATH=%{_prefix}/man:\${MANPATH} fi EOF %clean rm -rf ${RPM_BUILD_ROOT} %post /sbin/ldconfig /usr/bin/mpi-selector \ --register %{name}-%{version} \ --source-dir %{_bindir} \ --yes %postun /sbin/ldconfig /usr/bin/mpi-selector --unregister %{name}-%{version} --yes %files %defattr(-, root, root) # %_prefix %config %_sysconfdir/* %dir %_prefix %dir %_prefix/share %dir %_prefix/share/man %dir %_prefix/www %dir %_libdir %dir %_libdir/pkgconfig %_bindir %_mandir/man1 %_prefix/www/index.htm %_prefix/www/www1 %_libdir/*.so.* %files devel %defattr(-,root,root) %_mandir/man3 %_prefix/www/www3 %_libdir/*.a %_libdir/*.so %_includedir %attr(644, root, root) %_libdir/pkgconfig/*.pc %changelog * Mon Jun 15 2009 ro@suse.de - drop unused buildrequires for sysfsutils * Wed Dec 10 2008 olh@suse.de - use Obsoletes: -XXbit only for ppc64 to help solver during distupgrade (bnc#437293) * Tue Dec 09 2008 jjolly@suse.de - Updated to 1.2p1 release from OFED 1.4 GA - Fix shared-memory communication issue for AMD Barcelona systems. - Ignore the last bit of the pkey and remove the pkey_ix option since the index can be different on different machines. - Fix data types for memory allocations. Thanks for Dr. Bill Barth from TACC for the patches. - Fix a bug when MV2_NUM_HCAS is larger than the number of active HCAs. - Allow builds on architectures for which tuning parameters do not exist. - Always build and install mpirun_rsh in addition to the process manager(s) selected through the --with-pm mechanism. - Cleaner job abort handling - Ability to detect the path to mpispawn if the Linux proc filesystem is available. - Added Totalview debugger support - Stdin is only available to rank 0. Other ranks get /dev/null. - Add sequence numbers for RPUT and RGET finish packets. - Increase the number of allowed nodes for shared memory broadcast to 4K. - Use /dev/shm on Linux as the default temporary file path for shared memory communication. Thanks for Doug Johnson@OSC for the patch. - MV2_DEFAULT_MAX_WQE has been replaced with MV2_DEFAULT_MAX_SEND_WQE and MV2_DEFAULT_MAX_RECV_WQE for send and recv wqes, respectively. - Fix compilation warnings. - Properly handle the scenario in shared memory broadcast code when the datatypes of different processes taking part in broadcast are different. - Fix a bug in Checkpoint-Restart code to determine whether a connection is a shared memory connection or a network connection. - Support non-standard path for BLCR header files. - Increase the maximum heap size to avoid race condition in realloc(). - Use int32_t for rank for larger jobs with 32k processes or more. - Improve mvapich2-1.2 bandwidth to the same level of mvapich2-1.0.3. - An error handling patch for uDAPL interface. Thanks for Nilesh Awate for the patch. - Explicitly set some of the EP attributes when on demand connection is used in uDAPL interface. - Scalable and robust daemon-less job startup - Enhanced and robust mpirun_rsh framework (non-MPD-based) to provide scalable job launching on multi-thousand core clusters - Available for OpenFabrics (IB and iWARP) and uDAPL interfaces (including Solaris) - Adding support for intra-node shared memory communication with Checkpoint-restart - Allows best performance and scalability with fault-tolerance support - Enhancement to software installation - Change to full autoconf-based configuration - Adding an application (mpiname) for querying the MVAPICH2 library version and configuration information - Enhanced processor affinity using PLPA for multi-core architectures - Allows user-defined flexible processor affinity - Enhanced scalability for RDMA-based direct one-sided communication with less communication resource - Shared memory optimized MPI_Bcast operations - Optimized and tuned MPI_Alltoall - Change the default MV2_DAPL_PROVIDER to OpenIB-cma - Remove extraneous parameter is_blocking from the gen2 interface for MPIDI_CH3I_MRAILI_Get_next_vbuf - Explicitly name unions in struct ibv_wr_descriptor and reference the members in the code properly. - Change "inline" functions to "static inline" properly. - Increase the maximum number of buffer allocations for communication intensive applications - Corrections for warnings from the Sun Studio 12 compiler. - If malloc hook initialization fails, then turn off registration cache - Add MV_R3_THESHOLD and MV_R3_NOCACHE_THRESHOLD which allows R3 to be used for smaller messages instead of registering the buffer and using a zero-copy protocol. - Fixed an error in message coalescing. - Setting application initiated checkpoint as default if CR is turned on. - Enhance udapl initializaton, set all ep_attr fields properly. - Fixing a bug that miscalculates the receive size in case of complex datatype is used. - Minor patches for fixing (i) NBO for rdma-cm ports and (ii) rank variable usage in DEBUG_PRINT in rdma-cm.c - Message coalescing support to enable reduction of per Queue-pair send queues for reduction in memory requirement on large scale clusters. This design also increases the small message messaging rate significantly. Available for Open Fabrics Gen2-IB. - Hot-Spot Avoidance Mechanism (HSAM) for alleviating network congestion in large scale clusters. Available for Open Fabrics Gen2-IB. - RDMA CM based on-demand connection management for large scale clusters. Available for OpenFabrics Gen2-IB and Gen2-iWARP. - uDAPL on-demand connection management for large scale clusters. Available for uDAPL interface (including Solaris IB implementation). - RDMA Read support for increased overlap of computation and communication. Available for OpenFabrics Gen2-IB and Gen2-iWARP. - Application-initiated system-level (synchronous) checkpointing in addition to the user-transparent checkpointing. User application can now request a whole program checkpoint synchronously with BLCR by calling special functions within the application. Available for OpenFabrics Gen2-IB. - Network-Level fault tolerance with Automatic Path Migration (APM) for tolerating intermittent network failures over InfiniBand. Available for OpenFabrics Gen2-IB. - Integrated multi-rail communication support for OpenFabrics Gen2-iWARP. - Blocking mode of communication progress. Available for OpenFabrics Gen2-IB. - Fix for hang while using IMB with -multi option. - Fix for hang in memory allocations > 2^31 - 1. - Fix for RDMA_CM finalize rdma_destroy_id failure. - Added Timeout env variable for RDMA_CM ARP. - Fix for RDMA_CM invalid event in finalize. - Fix for shmem memory collectives related memory leaks - Updated src/mpi/romio/adio/ad_panfs/Makefile.in include path to find mpi.h. - Fixed header caching error on handling datatype messages with small vector sizes. - Change the finalization protocol for UD connection manager. - Fix for the "command line too long" problem. - Change the CKPT handling to invalidate all unused registration cache. - Added ofed 1.2 interface change patch for iwarp/rdma_cm - Fix for rdma_cm_get_event err in finalize. - Fix for when MV2_IBA_HCA is used. * Mon Dec 01 2008 ro@suse.de - add ExcludeArch for s390 s390x * Thu Oct 30 2008 olh@suse.de - obsolete old -XXbit packages (bnc#437293) * Tue Aug 21 2007 kejohnson@suse.de - Updated source tarball to OFED-1.2.5 release. * Tue Aug 07 2007 hvogel@suse.de - Update to version from OFED 1.2c * Tue Jul 10 2007 hvogel@suse.de - Initial Package, Version 0.9.8
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