Integrated environment for Bioinformatics with Ruby language
http://bioruby.org/
The BioRuby library follows the KISS principle in order to maximize its usability and efficiency for biologists as a daily tool.
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Source Files
| Filename | Size | Changed |
|---|---|---|
| bio-2.0.1.gem | 0001350656 1.29 MB | |
| rubygem-bioruby.changes | 0000001401 1.37 KB | |
| rubygem-bioruby.spec | 0000003302 3.22 KB |
Latest Revision
Lars Vogdt (lrupp)
accepted
request 803427
from
andy great (andythe_great)
(revision 5)
- Fix line warp.
- Update to 2.0.1
* Bug fixes Bio::GFF::GFF2::Record.parse did not return correct
object.
* Add script sample color_scheme_aa.rb: Example of
Bio::ColorScheme for an amino acid sequence.
* Add script sample fastq2html.rb: Visualization of FASTQ
sequences, colored by quality scores.
* Add script sample rev_comp.rb: Shows reverse-complement
sequences of the given sequences.
* Fix script na2aa.rb: Completely rewritten to fix bug. Shows
translated sequences.
* Added support for various sequence formats in
color_scheme_na.rb:
* CWL (Common Workflow Language) workflow files are added for
some sample scripts.
* CWL files sample script added: fastq2html.rb: fastq2html.cwl
with fastq2html.testdata.yaml
* CWL files sample script added: na2aa.rb: na2aa.cwl with
na2aa.testdata.yaml
* CWL files sample script added: rev_comp.rb: rev_comp.cwl with
rev_comp.testdata.yaml
- Fix build for Tumbleweend
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